Observable and Investigation Model Project

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Date

2017-02-20 20.00 UTC

GoToMeeting Details

https://global.gotomeeting.com/join/201313901

Attendees

Apologies

Objectives

Discussion items

ItemDescriptionOwnerNotesAction 
1Welcome & apologies
Daniel Karlsson
 
  • Check GotoMeeting number before next session
 
2Conflicts of interest
Daniel Karlsson
  • None stated
  
3Previous minutes & action items
Daniel Karlsson
   
4Generic Observables modelDaniel Karlsson
  • Distinguish | Time aspect | and | Process duration |.

 

 
5

LOINC - SNOMED CT cooperation

Swapna Abhyankar

  • LOINC allergens
    • "Allergens with plus sign": there are always distinct substances when plus sign is used in components, i.e. allergens in compound components behave like other kinds of substance.

 

 
6Molecular pathology observables

James R. Campbell

Daniel Karlsson

  • SNOMED CT representation of Gene locus
  • Review of modeling patterns
    • Polysomy
    • Rearrangement: duplication, deletion, insertion, translocation
    • Using property=Prid in LOINC
      • Presence as property type?
 
7London meeting

Daniel Karlsson

  • Full day requested
  • Items:
    • Pathology observables at Observables sessions...
    • Depolyment of Observables ontology for lab medicine
    • LOINC - SNOMED CT issues
    • Observables implementation issues
    • Observables Style Guide v1.0
  
8Next meeting(s)
Daniel Karlsson
  • Next meeting is 2017-03-06

 

 
9AOB
Daniel Karlsson
   

Meeting Files

  File Modified
Microsoft Excel Spreadsheet NebraskaLexiconContent_20170111.xlsx January Nebraska Lexicon content including inventory of observables, body structures and substances 2017-Feb-21 by James R. Campbell
Microsoft Word Document NebraskaLexicon_templates for review_20170217.docx Added HGVS nomenclature to discussion 2017-Feb-19 by James R. Campbell

 

Previous Meetings

TitleCreatorModified
E2O meeting 20220825Daniel Karlsson2022-Aug-25
2022-05-23 - OBSERVABLE MeetingDaniel Karlsson2022-May-24
E2O meeting 20220504Daniel Karlsson2022-May-05
2022-04-25 - OBSERVABLE MeetingDaniel Karlsson2022-Apr-26
2022-04-06 - OBSERVABLE Face-to-face MeetingDaniel Karlsson2022-Apr-25
2022-03-21 - OBSERVABLE MeetingDaniel Karlsson2022-Mar-31
E2O 23rd meeting 20220223Daniel Karlsson2022-Feb-23
2022-02-21 - OBSERVABLE MeetingDaniel Karlsson2022-Feb-22
E2O 22st meeting 20220202Daniel Karlsson2022-Feb-02
2022-01-24 - OBSERVABLE MeetingDaniel Karlsson2022-Jan-24
2021-12-20 - OBSERVABLE MeetingDaniel Karlsson2021-Dec-20
2021-11-15 - OBSERVABLE MeetingDaniel Karlsson2021-Dec-16
Find more results

 

2 Comments

  1. James R. Campbell

    Please expand my item on agenda to include discussion of several template patterns for molecular pathology.  I have attached file to the page with the material regarding gene rearrangements and additions to Property values.  I also posted several concerns regarding the tech preview on another page.  If we have time I would also like those issues to be on the agenda

    Jim

  2. James R. Campbell

    I have uploaded an inventory of genes and proteins built out thus far to serve molecular pathology for colon, breast, lung cancer and melanoma