2016-06-22 - SLPG Meeting

1

SLPG meetings will be recorded and recordings will be accessible to SLPG members.

Condition

[[ [1..1] @findingWithExplicitContext ]]:
[1..2] @RG1 { 246090004 |Associated finding| = ([[ [0..1] @associatedFinding ]]:
[0..1] @RG2 { 246112005 |Severity| = [[ [0..1] @severity]],
363698007 |Finding site| = [[ [0..1] @findingSite]] })
408732007 |Subject relationship context| = 410604004 |Subject of record|,
408731000 |Temporal context| = [[ [1..1] @temporalContext ]],
408729009 |Finding context| = [[ [1..1] @findingContext ]] }

AllergyIntolerance

[[ [1..1] @findingWithExplicitContext ]]:
[0..2] @RG1 { 246090004 |Associated finding| = ([[ [1..1] @associatedFinding ]]:
    370135005  |Pathological process| = [[ [0..1] @pathologicalProcess ]],
[0..1] @RG2 { 255234002 |After| = [[ [0..1] @after ]],
246075003 |Causative agent| = [[ [1..1] @causativeAgent ]] })
408732007 |Subject relationship context| = 410604004 |Subject of record|,
  408731000 |Temporal context| = [[ [1..1] @temporalContext ]],
408729009 |Finding context| = [[ [1..1] @findingContext ]] }

Procedure

129125009 |Procedure with explicit context|: 
[1..1] @RG1 { 363589002 |Associated procedure| = ( [[ @associatedProcedure ]] :
  [0..1] @RG2 { 363704007 |Procedure site| = [[ [0..1] @procedureSite ]],
  363699004 |Direct device| =  [[ [0..1] @directDevice ]],
  424361007 |Using substance| = [[ [0..1] < 105590001 |Substance| @usingSubstance ]],
  424226004 |Using device| = [[ [0..1] < 49062001 |Device|) @usingDevice]] }),
  408732007 |Subject relationship context| =  410604004 |Subject of record|,
  408731000 |Temporal context| =  410512000 |Current or specified time|,
  408730004 |Procedure context| = [[ [0..1] @procedureContext ]] }

SOURCE STRUCTURE

Condition: Resource

code [1]: CodeableConcept (coding [1..*] - system, version, code, display, userSelected [0..1] - text [0..1])

  category [0..1]: CodeableConcept (values: complaint | symptom | finding | diagnosis)

  clinicalStatus [0..1]: code (values: active | relapse | remission | resolved)

verificationStatus [1]: code (values: provisional | differential | confirmed | refuted | entered-in-error | unknown)

severity [0..1]: CodeableConcept

bodySite [0..*]: CodeableConcept

TARGET STRUCTURE

SCT_ConditionTemplate: SNOMEDCTExpressionTemplate

findingWithExplicitContext [1..1]: CodeableConcept

RGa [1..2]: RoleGroupElement

associatedFinding [0..1]: CodeableConcept

RGb [0..1]: RoleGroupElement

severity [0..1]: CodeableConcept

findingSite [0..1]: CodeableConcept

subjectRelationship [1]: CodeableConcept = 410604004 |Subject of record|

temporalContext [1]: CodeableConcept

findingContext [1]: CodeableConcept

RULES

rule_1: for  source.code as code where verificationStatus != "entered-in-error" make target.findingWithExplicitContext as fwec then {

rule_1a: for code where code in descendantsOf (404684003 |Clinical finding|) make target.findingWithExplicitContext = 413350009 |Finding with explicit context|, target.RGa as rga then {

rule_1aa: for code make rga.associatedFinding = code

rule_1ab: for code where severity in descendantsOf (272141005 | Severities|) OR findingSite in descendantsOf (123037004 |Body structure|) make rga.RGb as rgb then {

rule_1aba: for source.severity as sev where severity in descendantsOf (272141005 | Severities|) make rgb.severity = sev

rule_1abb: for source.bodySite as bs where findingSite in descendantsOf (123037004 |Body structure|) make rgb.findingSite = bs }

rule_1ac: for code make rga.subjectRelationship = 410604004 |Subject of record|

rule_1ad: for code make rga.temporalContext = 410512000 |Current or specified time|

rule_1ae: for source.clinicalStatus as cs, source.verificationStatus as vs  make rga.findingContext as fc then {

rule_1aea: for vs make fc.coding as coding then {

rule_1aeaa: for vs make coding.code = translate ((clinicalStatus,verificationStatus), 'status-to-findingContext-map', code)

rule_1aeb: for vs make code.system = "http://snomed.info/"

rule_1aec: for vs make code.display = preferredTerm (en-us, coding.code)

}

}

}

}

  rule_1b: for code where code in descendantsOf (413350009 |Finding with explicit context|) make target.findingWithExplicitContext = code then {

rule_1ba:

  }

}

Condition.code in descendantOf (404684003|Clinical finding|)

• Optionality
  • Optional refinements
  • Optional groups
• Names
  • Naming refinements
  • Naming groups
• References
  • References to location of values

Confirm date and time of next SLPG meeting - Wednesday 6th July, 20:00 UTC