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Date

2020-04-29

Time:

1800 - 1930 UTC

1100  - 1230 PDT

Zoom Meeting Details

Topic: SNOMED Editorial Advisory Group Conference Call
Time: Apr 29, 2020 11:00 AM Pacific Time (US and Canada)

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Meeting Files:


Meeting minutes:

The call recording is located here.


Objectives

  • Obtain consensus on agenda items

Discussion items

ItemDescriptionOwnerNotesAction
1Call to order and role call

Start recording!

 

2Conflicts of interest and agenda reviewNo conflicts noted 
3Additional description typesJim Case

As discussed in KL. Need a list of proposed description types to send to tech services for implementation. Guidance on use will need to be developed. Current use cases to consider are:

Implemented and populated in the International release:

  • near synonym - these can be either "broader than" terms or non-semantically equivalent but related terms (e.g. vaccination (procedure) vs. immunization (a process following vaccination or administration of immunoglobulin)
  • hypernyms - are these different than "near synonyms"

Implemented but NOT populated in the International release (i.e., for use in extensions)

  • search terms - colloquial terms - provided as an option for extensions, not populated in the international release
  • "Patient-friendly" or consumer terminology
  • abbreviations/truncation/acronym - abbreviated form

Issues within our current synonyms was identified in an AMIA paper in 2003:

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1480077/pdf/amia2003_0949.pdf

Discussion:

GRE: Not necessary to distinguish hypernyms and near synonyms. Consider a separate extension for "patient-friendly" terms. Need a separate language refset.

How to identify near synonyms? GRE: Had done some work 10 years ago. May be useful to get an idea of scope.

Want to avoid contaminating the terminology with non-synonymous descriptions. Do these need another description type or just a mechanism to segregate the descriptions from the main branch? Adding to another language refset would require modifications of the AP UI.

There is a risk in adding near synonyms if those descriptions are used in the EHR UI. Suggestion that we need to distinguish the near synonymy, e.g. broader than or narrower than. Narrower than are not synonymous at all as they are specializations of the parent.

Use the definition from ISO 25964-1:2011 as a guidance for defining near synonymy.

Discussion continued to next call without resolution

NEW

Summary of comments from CMAG:

In general, most extensions are already using a mechanism to manage patient-friendly terms within their extension and do not have an immediate need for a specific description type to be created. They did not address the issue of the value of near-synonymy and did not specify any other description types that might be useful. They also did not feel it was necessary to specifically call out abbreviations or truncations.

Questionable synonym review - termMED 2009

Proposal from Head of Terminology:

Add a single new description type representing "near synonymy" (name to be decided). Restrict its use to "broader than" concepts where the specificity is implied in clinical settings, or non-semantically equivalent but related terms, such as the outcome of a process.

Alternatively, add single new description type of "Hypernym" which expressly represents the broader than notion.

Both of these alternatives would require some detailed editorial guidance on when to allow the addition of these types of descriptions.

Determine whether it would be beneficial to repeat the work done by Guillermo and his group to reflect the extensive changes that have occurred in the terminology since the initial effort in 2009.

04/29/2020 Discussion:

For translations, having the designation of near synonymy is of benefit so that they can be ignored. This may be a patient safety issue. There must be a way to identify non-synonymous descriptions. GRE recommends that addition of two description types: Near synonym for use within the international release and "entry-type" description for use within extensions. The number of issues WRT near synonymy is related to the number of descriptions associated with a concept.

JRE: Favors hypernym. There are all types of non-synonymous acceptable descriptions.

KCA: Prefer accepted language for describing these. Hypernym and hyponym, but use should be discouraged. Provide a path to create new concepts from these descriptions.

GRE: Near synonym is the term that is described by the ISO standard. We need to enforce that superclasses and subclasses should not have the same description.

DKA: Synonymy is continuous as opposed to discrete, and is context dependent. There is a mechanism to handle this in language refsets rather than trying to create a new description type. Another issue, getting inter-rater agreement as to what does or does not qualify as a true synonym would be difficult.

AHO: We should not encourage the creation of these near synonyms. By creating new description types we might be creating a mechanism for users to request or create these.

GRE: The MAG/EAG discussion expressed a preference for a new description type over using language refsets. The International edition could adopt a policy of not accepting new near synonyms.

PAM: Concern is how this would be used by the editors. The distinction of whether to include a description as a true or near synonym is context dependent.

The question is what to do with the existing descriptions that we have that are non-synonymous. We need a pragmatic approach to determine whether a description represents the meaning by the FSN. A prior definition from ISO stated the issue of synonymy as being context dependent and continuous. There is a use case for near synonym in searching.

YGA: If searching is the primary use case, then we should mark descriptions in this way. We should get rid of non-synonyms, but keep search terms available because of their utility.

No resolution: discussion continued....

  • GRE: Post spreadsheet with multiple synonyms
  • Agree on new description type to be forwarded to the MAG for concurrence.
4Scale types vs. HAS INTERPRETATION in modeling Findings using Observable entitiesDaniel Karlsson

Does the HAS INTERPRETATION range need to match the SCALE of the Observable used as a value for INTERPRETS?

https://docs.google.com/presentation/d/143fQMaHsV9NTwK0ZdEpNLE2fsgefU6-vKANl7hT7ptY/edit?usp=sharing


5ECE UpdateBruce Goldberg
  • Approval for activating unapproved attribute, 410660005 |Aggravated by (attribute)| for modeling of disease exacerbations
  • Procedure complications:
    • Represent these as they are written out, i.e. do not assume that something is asserted to be a complication or sequela.
    • What does the assignment of a primitive sequela add, given that concepts will classify under other appropriate parents? 

Discussion:

Initial testing of the impact of inactivation of 362977000 |Sequela (disorder)| and replacement with 64572001 |Disease (disorder)| in concepts that had it assigned as the IS A parent results in a more complete set of subtypes classifying under 302049001 |Sequelae of disorders (disorder)| and 312087002 |Disorder following clinical procedure (disorder)|.

The availability of ECL was purported to be a more effective mechanism in identifying concepts that would be considered sequela or late effects than the manual assignment of a intermediate primitive concept.

Bruce Goldberg was asked to do more evaluation of the results of the inactivation of 362977000 |Sequela (disorder)|. If no issues remain, this concept will be inactivated in the Jan 2021 release. 

Time limitation. Remaining topics continued to a future call

  • Bruce Goldberg to complete evaluation of impact of inactivation of 362977000 |Sequela (disorder)|
6Morphology (disorder) conceptsJim Case

SNOMED CT currently has a large number of disorder concepts that solely represent morphologies. E.g. 416462003 |Wound (disorder)|; 416439000 |Lipogranuloma (disorder)|). While all of these are SD by simply using DIsease + morphology, other than as grouping concepts, are these valuable clinical terms. With the advent of ECL it is a simple query to identify all concepts that fit into these morphologies.

What should be the editorial guidance for the creation/maintenance of these terms?

Additionally, there are of over 5400 "grouper" terms in SNOMED CT. Many of these are abstract and are useful for navigation, but should not be used in clinical recording. There has been some interest in providing these as an exclusion refset in order to prevent them from being selectable for clinical use. However, some of the terms do have limited clinical usefulness (i.e patient reported clinical findings). It has been suggested that a task for the EAG would be to identify: 1) which terms in the list have clinical usefulness, 2) which terms provide meaningful navigational usefulness and 3) which terms should be inactivated.

File link: SNOMED CT Grouper sheet

Discussion:

Time limitation. Continued to a future call


7Next meetingEAG

Doodle poll to be sent out for meeting in May

Discussion:

Potential agenda items:

  • Update from concept inactivation group
  • Update from source of truth project
 

 

 

 

 

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