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Based on the HPO release of August 2024, and the SNOMED International release of April 2024, the mapping results are given below.
Note that 86% of the HPO terms are mappable either directly or involving an expression, so that the missing 13% could potentially be reduced with new SNOMED content.
The expressions have been validated using the Post-coordination Demonstrator resource. (Postcoordination Implementation Demo (ihtsdo.github.io))
Group | Number (%) |
---|---|
One to one map | 7184 (41%) |
One to many | 81 (0.5%) |
Map with expression | 7833 (45%) |
Map to parent | 2338 (13.4%) |
Clarification | 22 (0.1%) |
Out of scope | 685 (3.9) |
Total | 18,370 |
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Examples of post-coordination
HPO concept | SNOMED post-coordinated expression | ||
1 | HP:0001525 Severe failure to thrive | 54840006 |Failure to thrive (disorder)|: {246112005 |Severity (attribute)|=24484000 |Severe (severity modifier) (qualifier value)|} | approx (45%) |
2 | HP | ||
: | 3 | HP:||
0004363 Abnormal circulating calcium concentration. | 1217344005 |Finding of blood substance level (finding)|: {363713009 |Has interpretation (attribute)| =394844007 |Outside reference range (qualifier value)|, 363714003 |Interprets (attribute)| =312472004 |Blood calcium measurement (procedure)|} | approx 30% | |
3 | HP:6000554 Positive bloodstream plasmodium falciparum nucleic acid pathogen test. | 434156008 |Infectious agent in bloodstream (finding)|: {363713009 |Has interpretation (attribute)| = 10828004 |Positive (qualifier value)|, 363714003 |Interprets (attribute)| = (398545005 |Nucleic acid assay (procedure)|: 246093002 |Component (attribute)| =708396002 |Deoxyribonucleic acid of Plasmodium falciparum (substance)|, 370129005 |Measurement method (attribute)|=444077007 |Analysis using reverse transcriptase polymerase chain reaction technique (procedure)|)} | 637 (8%) | 5 | HP:0004880 Respiratory infections in early life | 275498002 |Respiratory tract infection (disorder)|: {246454002 |Occurrence (attribute)|=713152004 |Early childhood (qualifier value)|}, {263502005 |Clinical course (attribute)|=255227004 |Recurrent (qualifier value)|} | <7%